Seminars of the Focus Area Complex Systems

Prof. Dr. C. Beta, Prof. Dr. K. Dethloff, Prof. Dr. R. Engbert, Prof. Dr. M. Holschneider, Prof. Dr. W. Huisinga, Prof. Dr. Ralf Metzler, Prof. Dr. A. Pikovsky, Prof. Dr. S. Reich, Prof. Dr. M. Rosenblum, Prof. Dr. G. Rüdiger, Prof. Dr. T. Scheffer, Prof. Dr. F. Scherbaum, Prof. Dr. J. Selbig, Prof. Dr. F. Spahn

Seminar

Speaker: Kristen Feher, AG Bioinformatics, University of Potsdam

Title: From stoichiometry to correlation matrices: Building a bridge between metabolic theory and metabolomic data

Time: Wed, Mar 16, 2011, 10am

Place: MPI für Molekulare Pflanzenphysiologie, Room 0.21 in The Box

Abstract:
Steady state metabolomic measurements of biological replicates under the same experimental conditions exhibit a non-random correlation 'signature', which can be theoretically derived. However, it is hard to find heuristic explanations for high correlations as they rarely map to neighbours on the metabolic map, but rather they are emergent properties of the entire system. Given that the theory of metabolic networks is relatively well established, it is eventually desirable to validate metabolomic data against theoretical predictions. However, it is not a trivial task to characterize a high dimensional dataset with complex dependence structure. In this talk, we consider the emergent properties of two datasets (human glioma cell line and human mesenchymal stem cell line) via their eigenspectrums, and compare the differences between them using an amalgamation of multivariate methods.

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Past NLD Seminars (1994-2007) & (2008 ...)

Students' seminar: Theoretical Physics, PIK, Modeling & TSA Berlin-Potsdam-Colloquia: PhysGesellschaft Berlin, TU Berlin, Pro Physik, AIP, AEI, MPI-KGF, GFZ, HMI, PIK, AWI, Max Planck Institute for the History of Science, Mathematik, DPG Disputationen, & Vorschau UP

Udo Schwarz, Zentrum für Dynamik komplexer Systeme,
Universität Potsdam, Campus Golm Karl-Liebknecht-Str. 24, 14476 Potsdam, building 28, room 2.107
Phone: (+49-331) 977-1658, Fax : (+49-331) 977-1045

Email: Udo.Schwarz AT uni-potsdam.de

DFG SFB 1294

DFG Sonderforschungsbereich 1294 Data assimilation

DFG SPP 1488

DFG Schwerpunktprogramm 1488 Planetmag


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